Change search
Link to record
Permanent link

Direct link
Publications (5 of 5) Show all publications
Harris, K. L., Thomson, R. E. S., Gumulya, Y., Foley, G., Carrera-Pacheco, S. E., Syed, P., . . . Gillam, E. M. J. (2022). Ancestral Sequence Reconstruction of a Cytochrome P450 Family Involved in Chemical Defense Reveals the Functional Evolution of a Promiscuous, Xenobiotic-Metabolizing Enzyme in Vertebrates. Molecular biology and evolution, 39(6), Article ID msac116.
Open this publication in new window or tab >>Ancestral Sequence Reconstruction of a Cytochrome P450 Family Involved in Chemical Defense Reveals the Functional Evolution of a Promiscuous, Xenobiotic-Metabolizing Enzyme in Vertebrates
Show others...
2022 (English)In: Molecular biology and evolution, ISSN 0737-4038, E-ISSN 1537-1719, Vol. 39, no 6, article id msac116Article in journal (Refereed) Published
Abstract [en]

The cytochrome P450 family 1 enzymes (CYP1s) are a diverse family of hemoprotein monooxygenases, which metabolize many xenobiotics including numerous environmental carcinogens. However, their historical function and evolution remain largely unstudied. Here we investigate CYP1 evolution via the reconstruction and characterization of the vertebrate CYP1 ancestors. Younger ancestors and extant forms generally demonstrated higher activity toward typical CYP1 xenobiotic and steroid substrates than older ancestors, suggesting significant diversification away from the original CYP1 function. Caffeine metabolism appears to be a recently evolved trait of the CYP1A subfamily, observed in the mammalian CYP1A lineage, and may parallel the recent evolution of caffeine synthesis in multiple separate plant species. Likewise, the aryl hydrocarbon receptor agonist, 6-formylindolo[3,2-b]carbazole (FICZ) was metabolized to a greater extent by certain younger ancestors and extant forms, suggesting that activity toward FICZ increased in specific CYP1 evolutionary branches, a process that may have occurred in parallel to the exploitation of land where UV-exposure was higher than in aquatic environments. As observed with previous reconstructions of P450 enzymes, thermostability correlated with evolutionary age; the oldest ancestor was up to 35 °C more thermostable than the extant forms, with a 10T50 (temperature at which 50% of the hemoprotein remains intact after 10 min) of 71 °C. This robustness may have facilitated evolutionary diversification of the CYP1s by buffering the destabilizing effects of mutations that conferred novel functions, a phenomenon which may also be useful in exploiting the catalytic versatility of these ancestral enzymes for commercial application as biocatalysts.

Place, publisher, year, edition, pages
NLM (Medline), 2022
Keywords
ancestral sequence reconstruction, CYP1A2, CYP1B1, cytochrome P450, drug metabolism, thermostability, caffeine, cytochrome P450 1A1, xenobiotic agent, animal, genetics, mammal, metabolism, vertebrate, Animals, Cytochrome P-450 CYP1A1, Cytochrome P-450 Enzyme System, Mammals, Vertebrates, Xenobiotics
National Category
Chemical Engineering
Identifiers
urn:nbn:se:ri:diva-59767 (URN)10.1093/molbev/msac116 (DOI)2-s2.0-85131772183 (Scopus ID)
Note

This work was supported by Australian Research CouncilDiscovery Project Grants DP120101772 andDP160100865 and by AstraZeneca Innovative Medicinesand Early Development, Cardiovascular, Renal andMetabolism, Gothenburg. The authors are indebted toDrs Jan Bergman, Agneta Rannug, and Ulf Rannug for advice regarding FICZ biology and metabolism, to Dr JonasHellberg (Chemtronica, Sweden) for supplying FICZ forthese studies, and to Jong Min (Joseph) Baek and DrAmanda Nouwens for timely assistance with metaboliteidentification by LC–MS. Thanks are also extended to DrRoger Coulombe for donating the CYP1A5 plasmid andto Sabar Budiman and Dr Ian Ross for assistance with sequence validation. K.L.H., R.E.S.T., and G.F. were supportedby Australian Postgraduate Research Training Awards.

Available from: 2022-07-07 Created: 2022-07-07 Last updated: 2025-09-23Bibliographically approved
Janosik, T., Nilsson, A. N., Hällgren, A.-C., Hedberg, M., Bernlind, C., Rådberg, H., . . . Öhrman, O. (2022). Derivatizing of Fast Pyrolysis Bio-Oil and Coprocessing in Fixed Bed Hydrotreater. Energy & Fuels, 36(15), 8274-8287
Open this publication in new window or tab >>Derivatizing of Fast Pyrolysis Bio-Oil and Coprocessing in Fixed Bed Hydrotreater
Show others...
2022 (English)In: Energy & Fuels, ISSN 0887-0624, E-ISSN 1520-5029, Vol. 36, no 15, p. 8274-8287Article in journal (Refereed) Published
Abstract [en]

In several countries forest-based biofuels are being developed and to some extent also deployed. Fast pyrolysis bio-oil produced from, for example, sawdust, has now been coprocessed in fluid catalytic cracking refinery units in a number of commercial trials. However, this application is limited to about 10% of the total feed, and coprocessing in conventional fixed bed hydrotreaters is necessary to reach the high potential with this feedstock. Feeding and upgrading of fast pyrolysis bio-oil in a fixed bed reactor configuration is still problematic due to the inherent bio-oil properties. Stabilization of reactive compounds in fast pyrolysis bio-oil and mild hydrotreatment in a separate refining unit prior to refinery integration has therefore been developed the past decade. Another approach, presented here, involves complete dewatering of fast pyrolysis bio-oil by azeotropic distillation using mesityl oxide as the solvent, followed by conversion of the abundant hydroxyl compounds via mixed anhydride esterification methodology using an external source of mixed carboxylic acids of different chain lengths originating from renewable tall oil fatty acids, providing a lipophilic feed component. Dewatering and derivatizing were carried out in reactors up to 50 dm3 with a mass ratio of fast pyrolysis bio-oil to tall oil fatty acid of 10:13. The produced lipophilic oils were miscible with a petroleum light gas oil fraction and exhibited superior stability even after accelerated aging at elevated temperature (80 °C). The derivatized oils were thus mixed with light gas oil, with a proportion of 30 wt % derivatized oil in final blends and hydrotreated continuously in pilot fixed bed reactors for 14 days at 4 operating conditions without plugging or excessive exotherms. The test conditions were varied; the reactor pressure was either 55 or 80 bar, temperature 380 or 400 °C, and liquid hourly space velocity either 1 or 2 h-1 during the hydrotreatment. Successful hydrodeoxygenation and desulfurization were accomplished, whereas an increasing nitrogen concentration could be observed in the liquid products with the particular catalyst and reaction conditions employed. The observed hydrogen consumption (15-20 g/kg feed) was compared with the stoichiometric consumption for direct deoxygenation and with typical consumptions for industrial hydrotreated vegetable oil processing. The measured biogenic carbon content in hydrotreated liquid products (26.7%) agreed extremely well with the calculated biogenic carbon content in the hydrotreating feed (26.6%) that consisted of the blend of derivatized oil and petroleum light gas oil. The overall results are very promising since simple unit operations can be used to produce derivatized fast pyrolysis bio-oils that do not need additional standalone hydrotreating units but can be coprocessed in existing ones

Place, publisher, year, edition, pages
American Chemical Society, 2022
Keywords
Chemical reactors, Dewatering, Distillation, Fatty acids, Gas oils, Liquids, Petroleum refining, Coprocessing, Fast pyrolysis bio-oil, Fixed bed, Fixed bed reactor, Fixed-bed reactors, Hydrotreaters, Hydrotreatment, Light gasoils, Liquid products, Tall oil fatty acids, Fluid catalytic cracking
National Category
Chemical Engineering
Identifiers
urn:nbn:se:ri:diva-60177 (URN)10.1021/acs.energyfuels.2c01608 (DOI)2-s2.0-85136171355 (Scopus ID)
Note

Funding details: Energimyndigheten, Dnr 2017-010695, P45131-1; Funding text 1: The Swedish Energy Agency through project P45131-1 (Dnr 2017-010695) is gratefully acknowledged for financial support of parts of the development work. We also thank all colleagues within RISE and Preem who have contributed with ideas and recommendations during the project work.

Available from: 2022-09-29 Created: 2022-09-29 Last updated: 2025-09-23Bibliographically approved
Shafaghat, H., Linderberg, M., Janosik, T., Hedberg, M., Wiinikka, H., Sandström, L. & Johansson, A.-C. (2022). Enhanced Biofuel Production via Catalytic Hydropyrolysis and Hydro-Coprocessing. Energy & Fuels, 36(1), 450-462
Open this publication in new window or tab >>Enhanced Biofuel Production via Catalytic Hydropyrolysis and Hydro-Coprocessing
Show others...
2022 (English)In: Energy & Fuels, ISSN 0887-0624, E-ISSN 1520-5029, Vol. 36, no 1, p. 450-462Article in journal (Refereed) Published
Abstract [en]

In order to successfully integrate biomass pyrolysis oils as starting materials for conventional oil refineries, upgrading of the pyrolysis oils is needed to achieve desired properties, something which can be performed either as part of the pyrolysis process and/or by separate catalytic treatment of the pyrolysis intermediate oil products. In this study, the quality of stem wood-derived pyrolysis oil was improved via ex situ catalytic hydropyrolysis in a bench-scale pyrolyzer (stage 1), followed by catalytic hydro-coprocessing with fossil co-feed in a laboratory-scale high pressure autoclave (stage 2). The effect of pyrolysis upgrading conditions was investigated based on the quality of intermediate products and their suitability for hydro-coprocessing. HZSM-5 and Pt/TiO2 catalysts (400 °C, atmospheric pressure) were employed for ex situ pyrolysis, and the NiMoS/Al2O3 catalyst (330 °C, 100 bar H2 initial pressure) was used for hydro-coprocessing of the pyrolysis oil. The application of HZSM-5 in the pyrolysis of stem wood under a N2 atmosphere decreased the formation of acids, ketones, aldehydes, and furans and increased the production of aromatic hydrocarbons and phenolics (guaiacols and phenols). Replacing HZSM-5 with Pt/TiO2 and N2 with H2 resulted in complete conversion of guaiacols and significant production of phenols, with further indications of increased stability and reduced coking tendencies.

Place, publisher, year, edition, pages
American Chemical Society, 2022
National Category
Energy Engineering
Identifiers
urn:nbn:se:ri:diva-57373 (URN)10.1021/acs.energyfuels.1c03263 (DOI)2-s2.0-85122002259 (Scopus ID)
Available from: 2021-12-22 Created: 2021-12-22 Last updated: 2025-09-23Bibliographically approved
Janosik, T. & Berg, R. (2021). Chemistry of Silepins and their Analogs Containing Group 14 Elements. ARKIVOC, 2020(7), 379-400
Open this publication in new window or tab >>Chemistry of Silepins and their Analogs Containing Group 14 Elements
2021 (English)In: ARKIVOC, ISSN 1551-7004, E-ISSN 1551-7012, Vol. 2020, no 7, p. 379-400Article in journal (Refereed) Published
Abstract [en]

The chemistry of silepins and related seven-membered heterocycles containing group 14 elements is reviewed. 

Place, publisher, year, edition, pages
Arkat, 2021
Keywords
Germepins, Seven-membered heterocycles, Silepins, Stannepins
National Category
Pharmaceutical Sciences
Identifiers
urn:nbn:se:ri:diva-52904 (URN)10.24820/ARK.5550190.P011.371 (DOI)2-s2.0-85102692068 (Scopus ID)
Available from: 2021-04-09 Created: 2021-04-09 Last updated: 2025-09-23Bibliographically approved
Janosik, T., Rannug, A., Rannug, U., Wahlström, N., Slätt, J. & Bergman, J. (2018). Chemistry and Properties of Indolocarbazoles. Chemical Reviews, 118(18), 9058-9128
Open this publication in new window or tab >>Chemistry and Properties of Indolocarbazoles
Show others...
2018 (English)In: Chemical Reviews, ISSN 0009-2665, E-ISSN 1520-6890, Vol. 118, no 18, p. 9058-9128Article in journal (Refereed) Published
Abstract [en]

The indolocarbazoles are an important class of nitrogen heterocycles which has evolved significantly in recent years, with numerous studies focusing on their diverse biological effects, or targeting new materials with potential applications in organic electronics. This review aims at providing a broad survey of the chemistry and properties of indolocarbazoles from an interdisciplinary point of view, with particular emphasis on practical synthetic aspects, as well as certain topics which have not been previously accounted for in detail, such as the occurrence, formation, biological activities, and metabolism of indolo[3,2- b]carbazoles. The literature of the past decade forms the basis of the text, which is further supplemented with older key references.

National Category
Natural Sciences
Identifiers
urn:nbn:se:ri:diva-35139 (URN)10.1021/acs.chemrev.8b00186 (DOI)30191712 (PubMedID)2-s2.0-85053208178 (Scopus ID)
Available from: 2018-09-11 Created: 2018-09-11 Last updated: 2025-09-23Bibliographically approved
Organisations
Identifiers
ORCID iD: ORCID iD iconorcid.org/0000-0003-4198-6104

Search in DiVA

Show all publications